This function is used to make scatter plots for the raw data of all the features. It generates an HTML report in the fashion of the other functions of the SplineOmics package which contains all the scatter plots.
Usage
make_scatter_plots_html(
data,
meta,
output_file = "scatter_report",
meta_replicate_column = NULL,
features_per_file = 500
)Arguments
- data
A matrix with features as rows and samples as columns. Row names should be feature names.
- meta
A data frame with the meta information. Must contain a numeric column "Time".
- output_file
The name of the HTML output file.
- meta_replicate_column
Column name of the column in meta that contains the info about the replicates, such as reactor.