gsea | Omics-Datatype: PTX | Date-Time: 26_09_2024-14_50_54




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Report Info ℹ

omics data type :PTX
data description :Proteomics data of CHO cells
data collection date :February 2024
meta condition :NA
meta batch :NA
limma design :NA
analyst name :Thomas Rauter
contact info :thomas.rauter@plus.ac.at
project name :DGTX
method description :NA
results summary :NA
conclusions :NA

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Databases used: WikiPathways_2019_Human, NCI-Nature_2016, TRRUST_Transcription_Factors_2019, MSigDB_Hallmark_2020, GO_Cellular_Component_2018, CORUM, KEGG_2019_Human, TRANSFAC_and_JASPAR_PWMs, ENCODE_and_ChEA_Consensus_TFs_from_ChIP-X, GO_Biological_Process_2018, GO_Molecular_Function_2018, Human_Gene_Atlas

Table of Contents

Phase_Exponential

Plot

Enrichment Results

dbBioProcessclusteradj.p_valueodds_ratiosavg_odds_ratio
GO_Cellular_Component_2018hydrogen-exporting ATPase activity, phosphorylative mechanism (GO:0008553)60.000102676624306606458.36458.36
GO_Biological_Process_2018vacuolar proton-transporting V-type ATPase complex (GO:0016471)60.000119700699997303339.411764705882339.411764705882
GO_Cellular_Component_2018proton-transporting ATPase activity, rotational mechanism (GO:0046961)60.000143990334726833269.623529411765269.623529411765
GO_Cellular_Component_2018hydrogen-exporting ATPase activity (GO:0036442)60.000143990334726833208.345454545455208.345454545455
GO_Cellular_Component_2018ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism (GO:0015662)60.000143990334726833199.286956521739199.286956521739
GO_Cellular_Component_2018ATPase activity, coupled to transmembrane movement of ions, rotational mechanism (GO:0044769)60.000147896702441839176.292307692308176.292307692308
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xphagosome acidification (GO:0090383)60.000871332319882685171.821428571429171.821428571429
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xphagosome maturation (GO:0090382)60.000871332319882685145.787878787879145.787878787879
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xintracellular pH reduction (GO:0051452)60.000871332319882685141.5141.5
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xferric iron transport (GO:0015682)60.000871332319882685130.027027027027130.027027027027
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xtransferrin transport (GO:0033572)60.000871332319882685130.027027027027130.027027027027
Human_Gene_AtlasCollecting duct acid secretion60.00183364151160159115.585185185185115.585185185185
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xinsulin receptor signaling pathway (GO:0008286)60.000126750514441083106.125106.125
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of alcohol biosynthetic process (GO:1902930)40.00401080066192688103.092857142857103.092857142857
GO_Cellular_Component_2018hydrogen ion transmembrane transporter activity (GO:0015078)60.00050056785501671388.146153846153988.1461538461539
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of cholesterol biosynthetic process (GO:0045540)40.0040108006619268888.006097560975688.0060975609756
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of cholesterol metabolic process (GO:0090181)40.0040108006619268885.910714285714385.9107142857143
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of steroid biosynthetic process (GO:0050810)40.0040108006619268880.183333333333380.1833333333333
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xcellular response to insulin stimulus (GO:0032869)60.00027861907950386965.013513513513565.0135135135135
Human_Gene_AtlasVibrio cholerae infection60.0031808701447450362.41662.416
TRANSFAC_and_JASPAR_PWMsVDR human40.0076973677542369651.809523809523851.8095238095238
Human_Gene_AtlasEpithelial cell signaling in Helicobacter pylori infection60.0038708332541245645.894117647058845.8941176470588
GO_Molecular_Function_2018Pituitary30.0056151518650334945.486394557823145.4863945578231
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of macroautophagy (GO:0016241)60.0068036885160714541.119658119658141.1196581196581
Human_Gene_AtlasSynaptic vesicle cycle60.0038708332541245640.010256410256440.0102564102564
Human_Gene_AtlasRheumatoid arthritis60.0042085991623915634.294505494505534.2945054945055
GO_Biological_Process_2018lytic vacuole membrane (GO:0098852)60.01142394115686824.658119658119724.6581196581197
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xregulation of autophagy (GO:0010506)60.018384631699150923.583333333333323.5833333333333
Human_Gene_AtlasOxidative phosphorylation60.0074368230481016123.464661654135323.4646616541353
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xion transmembrane transport (GO:0034220)60.019387014937016421.868181818181821.8681818181818
GO_Cellular_Component_2018cytosolic part (GO:0044445)50.045838159638348721.637521.6375
Human_Gene_AtlasPhagosome60.0082927868032371820.531578947368420.5315789473684
GO_Biological_Process_2018lysosomal membrane (GO:0005765)60.01142394115686819.760273972602719.7602739726027
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xtransmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169)60.0031067198649507118.177581863979818.1775818639798
CORUMFOSL2 ENCODE40.035616189419195917.643990929705217.6439909297052
Human_Gene_AtlasKidney50.023132180579801417.122919334186917.1229193341869
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xion transport (GO:0006811)60.022117707914860116.589655172413816.5896551724138
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xprotein transport (GO:0015031)60.022737824033541914.712538226299714.7125382262997
GO_Biological_Process_2018lysosome (GO:0005764)60.015219227112895113.640661938534313.6406619385343
Human_Gene_AtlasCytokine-cytokine receptor interaction40.029122278442927313.268707482993213.2687074829932
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xtransmembrane transport (GO:0055085)60.026765160780801412.693931398416912.6939313984169
CORUMBCL3 ENCODE40.035616189419195912.667480667480712.6674806674807
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-Xvesicle-mediated transport (GO:0016192)30.043856728217723410.033368091762310.0333680917623
Human_Gene_AtlasHuman papillomavirus infection60.0327694204719159.45696969696979.4569696969697
TRANSFAC_and_JASPAR_PWMsRELA human50.03225291726625957.229235880398677.22923588039867
TRANSFAC_and_JASPAR_PWMsNFKB1 human50.03225291726625957.181518151815187.18151815181518

Count smaller 2 Enrichment Results

Phase_Stationary

Plot

Enrichment Results

dbBioProcessclusteradj.p_valueodds_ratiosavg_odds_ratio
GO_Biological_Process_2018ribosomal small subunit biogenesis (GO:0042274)10.011932032275331191.638095238095291.6380952380952
CORUM40S ribosomal subunit, cytoplasmic (human)10.00037148784209503288.419354838709788.4193548387097
GO_Cellular_Component_2018cytosolic small ribosomal subunit (GO:0022627)10.0053583519150894757.757.7
GO_Cellular_Component_2018small ribosomal subunit (GO:0015935)10.0053583519150894753.425925925925953.4259259259259
GO_Biological_Process_2018SRP-dependent cotranslational protein targeting to membrane (GO:0006614)10.011932032275331145.819047619047645.8190476190476
GO_Biological_Process_2018cotranslational protein targeting to membrane (GO:0006613)10.011932032275331143.869300911854143.8693009118541
GO_Biological_Process_2018protein targeting to ER (GO:0045047)10.011932032275331142.078717201166242.0787172011662
GO_Biological_Process_2018viral gene expression (GO:0019080)10.011932032275331137.150579150579137.1505791505791
GO_Biological_Process_2018nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)10.011932032275331136.493046776232636.4930467762326
GO_Biological_Process_2018viral transcription (GO:0019083)10.011932032275331136.172932330827136.1729323308271
CORUMRibosome, cytoplasmic (human)10.0012942157079439833.839506172839533.8395061728395
TRRUST_Transcription_Factors_2019Cytoplasmic Ribosomal Proteins WP47710.005941634778146627.869662921348327.8696629213483
GO_Biological_Process_2018nuclear-transcribed mRNA catabolic process (GO:0000956)10.01597175333697823.564081632653123.5640816326531
GO_Biological_Process_2018peptide biosynthetic process (GO:0043043)10.01597175333697823.564081632653123.5640816326531
GO_Cellular_Component_2018cytosolic ribosome (GO:0022626)10.018925972895332623.0823.08
GO_Biological_Process_2018rRNA metabolic process (GO:0016072)10.01597175333697820.515991471215420.5159914712154
GO_Biological_Process_2018rRNA processing (GO:0006364)10.01597175333697820.313863476425120.3138634764251
GO_Biological_Process_2018viral process (GO:0016032)10.01597175333697818.659340659340718.6593406593407
GO_Biological_Process_2018ribosome biogenesis (GO:0042254)10.01597175333697818.166142227816218.1661422278162
GO_Biological_Process_2018ncRNA processing (GO:0034470)10.01597175333697818.086466165413518.0864661654135
GO_Cellular_Component_2018cytosolic part (GO:0044445)10.023045614744330418.0312518.03125
GO_Biological_Process_2018translation (GO:0006412)10.01597175333697817.698344573881117.6983445738811
ENCODE_and_ChEA_Consensus_TFs_from_ChIP-XSALL4 CHEA10.034706319734584717.534647887323917.5346478873239
KEGG_2019_HumanRibosome10.043535812776454716.997821350762516.9978213507625
GO_Biological_Process_2018cellular macromolecule biosynthetic process (GO:0034645)10.025089281866426111.205745341614911.2057453416149
GO_Biological_Process_2018gene expression (GO:0010467)10.02927023439334410.009015256588110.0090152565881
GO_Cellular_Component_2018chromatin (GO:0000785)10.04360578651629549.713804713804719.71380471380471
GO_Biological_Process_2018cellular protein metabolic process (GO:0044267)10.03579979844338668.502503681885138.50250368188513

Count smaller 2 Enrichment Results