Process Level Cluster — process_level_cluster • SplineOmics

Processes clustering for a specific level within a condition using the provided top table and spline parameters.

Usage

process_level_cluster(
  top_table,
  cluster_size,
  level,
  meta,
  condition,
  spline_params,
  mode
)

Arguments

top_table: A dataframe containing the top table results from limma.
cluster_size: The size of clusters to generate.
level: The level within the condition to process.
meta: A dataframe containing metadata.
condition: A character string specifying the condition.
spline_params: A list of spline parameters for the analysis.
mode: A character string specifying the mode ('isolated' or 'integrated').

Value

A list containing the clustering results, including curve values and the design matrix.

See also

get_curve_values, normalize_curves, hierarchical_clustering